Index

A

api_keys_active() (in module nedrex.core)

B

bicon_request() (in module nedrex.bicon)

build_request() (in module nedrex.graph)

C

check_bicon_status() (in module nedrex.bicon) check_build_status() (in module nedrex.graph) check_closeness_status() (in module nedrex.closeness) check_comorbiditome_status() (in module nedrex.comorbiditome) check_diamond_status() (in module nedrex.diamond)

check_robust_status() (in module nedrex.robust) check_trustrank_status() (in module nedrex.trustrank) check_validation_status() (in module nedrex.validation) closeness_submit() (in module nedrex.closeness) ConfigError

D

diamond_submit() (in module nedrex.diamond) domino_submit() (in module nedrex.domino) download_bicon_data() (in module nedrex.bicon) download_closeness_results() (in module nedrex.closeness) download_comorbiditome_build() (in module nedrex.comorbiditome)

download_diamond_results() (in module nedrex.diamond) download_graph() (in module nedrex.graph) download_lengths_map() (in module nedrex.static) download_robust_results() (in module nedrex.robust) download_trustrank_results() (in module nedrex.trustrank) drug_validation_submit() (in module nedrex.validation)

G

get_api_key() (in module nedrex.core) get_collection_attributes() (in module nedrex.core) get_disorder_ancestors() (in module nedrex.disorder) get_disorder_children() (in module nedrex.disorder) get_disorder_descendants() (in module nedrex.disorder) get_disorder_parents() (in module nedrex.disorder) get_drugs_indicated_for_disorders() (in module nedrex.relations) get_drugs_targetting_gene_products() (in module nedrex.relations) get_drugs_targetting_proteins() (in module nedrex.relations) get_edge_types() (in module nedrex.core) get_edges() (in module nedrex.core) get_effect_choices() (in module nedrex.variants) get_encoded_proteins() (in module nedrex.relations)

get_icd10_associations() (in module nedrex.comorbiditome) get_license() (in module nedrex.static) get_metadata() (in module nedrex.static) get_node_ids() (in module nedrex.core) get_node_types() (in module nedrex.core) get_nodes() (in module nedrex.core) get_pagination_limit() (in module nedrex.core) get_review_status_choices() (in module nedrex.variants) get_variant_based_disorder_associated_genes() (in module nedrex.variants) get_variant_based_gene_associated_disorders() (in module nedrex.variants) get_variant_disorder_associations() (in module nedrex.variants) get_variant_gene_associations() (in module nedrex.variants) get_vpd() (in module nedrex.vpd)

I

iter_edges() (in module nedrex.core) iter_nodes() (in module nedrex.core)

iter_variant_disorder_associations() (in module nedrex.variants) iter_variant_gene_associations() (in module nedrex.variants)

J

joint_validation_submit() (in module nedrex.validation)

K

kpm_submit() (in module nedrex.kpm)

M

map_icd10_to_mondo() (in module nedrex.comorbiditome) map_mondo_to_icd10() (in module nedrex.comorbiditome) module nedrex nedrex.bicon nedrex.closeness nedrex.comorbiditome nedrex.core nedrex.diamond nedrex.disorder nedrex.domino nedrex.exceptions nedrex.graph nedrex.kpm nedrex.must nedrex.neo4j nedrex.ppi nedrex.relations nedrex.robust nedrex.static nedrex.trustrank nedrex.validation nedrex.variants nedrex.vpd

module_validation_submit() (in module nedrex.validation) must_request() (in module nedrex.must)

N

nedrex module nedrex.bicon module nedrex.closeness module nedrex.comorbiditome module nedrex.core module nedrex.diamond module nedrex.disorder module nedrex.domino module nedrex.exceptions module nedrex.graph module nedrex.kpm module

nedrex.must module nedrex.neo4j module nedrex.ppi module nedrex.relations module nedrex.robust module nedrex.static module nedrex.trustrank module nedrex.validation module nedrex.variants module nedrex.vpd module NeDRexError neo4j_query() (in module nedrex.neo4j)

P

ppis() (in module nedrex.ppi)

R

robust_submit() (in module nedrex.robust)

S

search_by_icd10() (in module nedrex.disorder)

submit_comorbiditome_build() (in module nedrex.comorbiditome)

T

trustrank_submit() (in module nedrex.trustrank)